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  5. LOC_Os01g27700.1

LOC_Os01g27700.1


Description : Laccase/Diphenol oxidase family protein


Gene families : OG_01_0000046 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000046_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g27700.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g27700.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_151
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_7


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR034285 CuRO_2_LCC CDD 142 288
IPR034289 CuRO_3_LCC CDD 399 535
IPR008972 Cupredoxin SUPERFAMILY 28 122
IPR008972 Cupredoxin Gene3D 146 327
IPR001117 Cu-oxidase_2nd Pfam 142 289
IPR008972 Cupredoxin SUPERFAMILY 142 329
IPR011707 Cu-oxidase-like_N Pfam 38 129
IPR008972 Cupredoxin Gene3D 20 145
IPR045087 Cu-oxidase_fam PANTHER 140 552
IPR011706 Cu-oxidase_C Pfam 422 535
IPR008972 Cupredoxin Gene3D 358 552
IPR045087 Cu-oxidase_fam PANTHER 12 129
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 515 526
IPR033138 Cu_oxidase_CS ProSitePatterns 510 530
IPR034288 CuRO_1_LCC CDD 34 129
IPR008972 Cupredoxin SUPERFAMILY 336 550
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 553 5.3e-65 142 527
No external refs found!