LOC_Os01g27990.1

Description : Nuclear pore localisation protein NPL4

Gene families : OG_01_0008986 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008986_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g27990.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g27990.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_52
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_228

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007717	NPL4_C	CDD	119	376
IPR000626	Ubiquitin-like_dom	ProSiteProfiles	1	81
IPR037518	MPN	ProSiteProfiles	130	279
IPR016563	Npl4	PANTHER	2	92
IPR016563	Npl4	PANTHER	104	413
IPR007717	NPL4_C	Pfam	155	290
IPR029071	Ubiquitin-like_domsf	SUPERFAMILY	1	85

No CAZYmes available for this sequence

External Links

No external refs found!