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  5. LOC_Os01g28450.1

LOC_Os01g28450.1


Description : pathogenesis-related gene 1


Gene families : OG_01_0001106 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001106_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g28450.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g28450.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_48
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_162


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014044 CAP_domain Pfam 31 152
IPR035940 CAP_sf Gene3D 19 164
IPR002413 V5_allergen-like PRINTS 118 137
IPR002413 V5_allergen-like PRINTS 45 63
IPR002413 V5_allergen-like PRINTS 93 108
IPR001283 CRISP-related PRINTS 95 108
IPR001283 CRISP-related PRINTS 119 135
IPR001283 CRISP-related PRINTS 147 160
IPR001283 CRISP-related PRINTS 45 63
IPR018244 Allrgn_V5/Tpx1_CS ProSitePatterns 147 158
IPR014044 CAP_domain SMART 24 160
IPR035940 CAP_sf SUPERFAMILY 20 164
IPR018244 Allrgn_V5/Tpx1_CS ProSitePatterns 120 130
IPR001283 CRISP-related PANTHER 5 164

No CAZYmes available for this sequence

No external refs found!