LOC_Os01g33080.1

Description : Actin binding Calponin homology (CH) domain-containing protein

Gene families : OG_01_0000698 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000698_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g33080.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g33080.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_388
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_70

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0007015	actin filament organization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0051015	actin filament binding	ISM	GOs from InterProScan
BP	GO:0051017	actin filament bundle assembly	ISM	GOs from InterProScan
BP	GO:0061572	actin filament bundle organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036872	CH_dom_sf	Gene3D	279	408
IPR001589	Actinin_actin-bd_CS	ProSitePatterns	245	269
IPR036872	CH_dom_sf	Gene3D	423	540
IPR039959	Fimbrin/Plastin	PANTHER	1	694
IPR001715	CH_dom	CDD	428	531
IPR001715	CH_dom	CDD	302	403
IPR036872	CH_dom_sf	Gene3D	541	653
IPR001715	CH_dom	ProSiteProfiles	427	533
IPR001715	CH_dom	ProSiteProfiles	301	405
IPR036872	CH_dom_sf	Gene3D	152	278
IPR001715	CH_dom	ProSiteProfiles	156	273
IPR001715	CH_dom	CDD	157	271
IPR001715	CH_dom	ProSiteProfiles	548	656
IPR001715	CH_dom	SMART	303	403
IPR001715	CH_dom	SMART	158	271
IPR001715	CH_dom	SMART	429	531
IPR001715	CH_dom	SMART	550	654
IPR036872	CH_dom_sf	SUPERFAMILY	154	653
IPR001715	CH_dom	Pfam	551	655
IPR001715	CH_dom	Pfam	186	271
IPR001715	CH_dom	Pfam	429	532
IPR001715	CH_dom	Pfam	302	404

No CAZYmes available for this sequence

External Links

No external refs found!