Sevir.4G050800.1

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_01_0006715 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006715_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G050800.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G050800.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_103

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR035979	RBD_domain_sf	SUPERFAMILY	86	166
IPR000504	RRM_dom	Pfam	94	162
IPR000504	RRM_dom	SMART	93	165
IPR000504	RRM_dom	ProSiteProfiles	92	169
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	80	234
IPR025715	FoP_C	SMART	181	254
IPR025715	FoP_C	Pfam	195	248

No CAZYmes available for this sequence

External Links

No external refs found!