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  5. LOC_Os01g41510.1

LOC_Os01g41510.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0015565 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015565_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g41510.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g41510.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_128
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_35


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
BP GO:0019722 calcium-mediated signaling ISM GOs from InterProScan
MF GO:0019900 kinase binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom Pfam 53 97
IPR011992 EF-hand-dom_pair SUPERFAMILY 25 206
IPR002048 EF_hand_dom ProSiteProfiles 151 186
IPR002048 EF_hand_dom Pfam 155 180
IPR002048 EF_hand_dom ProSiteProfiles 107 142
IPR002048 EF_hand_dom ProSiteProfiles 70 105
IPR002048 EF_hand_dom SMART 111 139
IPR002048 EF_hand_dom SMART 155 183
IPR002048 EF_hand_dom SMART 74 102
IPR045198 CNBL1-10 PANTHER 2 218

No CAZYmes available for this sequence

No external refs found!