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Description : LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
Gene families : OG_01_0007042 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007042_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g42260.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g42260.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_129 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003714 | transcription corepressor activity | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR044716 | LEUNIG-like | PANTHER | 1 | 876 |
| IPR006594 | LisH | SMART | 8 | 40 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 586 | 617 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 672 | 714 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 648 | 662 |
| IPR006594 | LisH | ProSiteProfiles | 8 | 40 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 737 | 876 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 629 | 670 |
| IPR001680 | WD40_rpt | SMART | 837 | 876 |
| IPR001680 | WD40_rpt | SMART | 622 | 661 |
| IPR001680 | WD40_rpt | SMART | 665 | 705 |
| IPR001680 | WD40_rpt | SMART | 795 | 834 |
| IPR001680 | WD40_rpt | SMART | 579 | 618 |
| IPR001680 | WD40_rpt | SMART | 708 | 747 |
| IPR001680 | WD40_rpt | SMART | 751 | 789 |
| IPR006594 | LisH | Pfam | 10 | 36 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 571 | 736 |
| IPR001680 | WD40_rpt | Pfam | 669 | 705 |
| IPR001680 | WD40_rpt | Pfam | 592 | 617 |
| IPR001680 | WD40_rpt | Pfam | 624 | 661 |
| IPR001680 | WD40_rpt | Pfam | 754 | 789 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 844 | 876 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 588 | 876 |
No CAZYmes available for this sequence
| No external refs found! |