LOC_Os01g42500.1

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0013799 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013799_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g42500.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g42500.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_379
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011016	Znf_RING-CH	ProSiteProfiles	47	112
IPR011016	Znf_RING-CH	Pfam	55	105
IPR013083	Znf_RING/FYVE/PHD	Gene3D	39	118
IPR011016	Znf_RING-CH	SMART	54	106

No CAZYmes available for this sequence

External Links

No external refs found!