LOC_Os01g43630.1

Description : adaptin family protein

Gene families : OG_01_0002144 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002144_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g43630.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g43630.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_152
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	ISM	GOs from InterProScan
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030117	membrane coat	ISM	GOs from InterProScan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	ISM	GOs from InterProScan
MF	GO:0030276	clathrin binding	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR026739	AP_beta	PANTHER	239	893
IPR016342	AP_complex_bsu_1_2_4	PIRSF	669	895
IPR016342	AP_complex_bsu_1_2_4	PIRSF	11	691
IPR011989	ARM-like	Gene3D	14	658
IPR026739	AP_beta	PANTHER	17	194
IPR015151	B-adaptin_app_sub_C	Pfam	777	889
IPR016024	ARM-type_fold	SUPERFAMILY	26	648
IPR015151	B-adaptin_app_sub_C	SMART	773	890
IPR012295	TBP_dom_sf	Gene3D	763	893
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	28	601

No CAZYmes available for this sequence

External Links

No external refs found!