LOC_Os01g46932.1

Description : E2F/DP family winged-helix DNA-binding domain

Gene families : OG_01_0003648 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003648_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g46932.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g46932.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321

Type	GO Term	Name	Evidence	Source
CC	GO:0000814	ESCRT II complex	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	ISM	GOs from InterProScan
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008570	ESCRT-II_cplx_Vps25-sub	Pfam	13	145
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	7	107
IPR014041	ESCRT-II_cplx_Vps25-sub_N	Gene3D	5	101
IPR008570	ESCRT-II_cplx_Vps25-sub	PANTHER	1	179
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	103	177
IPR036388	WH-like_DNA-bd_sf	Gene3D	103	178

No CAZYmes available for this sequence

External Links

No external refs found!