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  5. LOC_Os01g47180.1

LOC_Os01g47180.1


Description : Werner syndrome-like exonuclease


Gene families : OG_01_0006102 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006102_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g47180.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g47180.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_142
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_211


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
BP GO:0006139 nucleobase-containing compound metabolic process ISM GOs from InterProScan
MF GO:0008408 3'-5' exonuclease activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002562 3'-5'_exonuclease_dom SMART 94 272
IPR012337 RNaseH-like_sf SUPERFAMILY 109 270
IPR036397 RNaseH_sf Gene3D 80 270
IPR002562 3'-5'_exonuclease_dom Pfam 104 269

No CAZYmes available for this sequence

No external refs found!