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  5. LOC_Os01g47650.1

LOC_Os01g47650.1


Description : vacuoleless1 (VCL1)


Gene families : OG_01_0004421 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004421_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g47650.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g47650.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_267
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_201


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006886 intracellular protein transport ISM GOs from InterProScan
BP GO:0007033 vacuole organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006926 Vps16_N Pfam 62 447
IPR016534 VPS16 PANTHER 1 877
IPR006925 Vps16_C Pfam 543 858
IPR038132 Vps16_C_sf Gene3D 685 778
IPR016534 VPS16 PIRSF 2 882

No CAZYmes available for this sequence

No external refs found!