LOC_Os01g48180.1

Description : Homeodomain-like transcriptional regulator

Gene families : OG_01_0004864 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004864_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g48180.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g48180.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_304
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_9

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0006357	regulation of transcription by RNA polymerase II	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044977	RLT1-3	PANTHER	7	365
IPR028941	WHIM2_dom	Pfam	955	1028
IPR007759	Asxl_HARE-HTH	ProSiteProfiles	555	624
IPR018501	DDT_dom	SMART	385	438
IPR018501	DDT_dom	Pfam	387	435
IPR028942	WHIM1_dom	Pfam	778	819
IPR018501	DDT_dom	ProSiteProfiles	379	438
IPR007759	Asxl_HARE-HTH	Pfam	555	622
IPR044977	RLT1-3	PANTHER	385	1604

No CAZYmes available for this sequence

External Links

No external refs found!