LOC_Os01g49890.1

Description : Pyridoxal-5\'-phosphate-dependent enzyme family protein

Gene families : OG_01_0003014 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003014_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g49890.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g49890.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_204
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_207

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	ISM	GOs from InterProScan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR004450	Thr_synthase-like	TIGRFAM	152	479
IPR036052	TrpB-like_PALP_sf	SUPERFAMILY	82	520
IPR001926	TrpB-like_PALP	Pfam	164	474
IPR000634	Ser/Thr_deHydtase_PyrdxlP-BS	ProSitePatterns	193	207
IPR036052	TrpB-like_PALP_sf	Gene3D	263	525
IPR036052	TrpB-like_PALP_sf	Gene3D	74	262

No CAZYmes available for this sequence

External Links

No external refs found!