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  5. LOC_Os01g51840.1

LOC_Os01g51840.1


Description : IQ-domain 28


Gene families : OG_01_0007858 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007858_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g51840.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g51840.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_71
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_109


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 121 146
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 97 125
IPR000048 IQ_motif_EF-hand-BS Pfam 121 138
IPR000048 IQ_motif_EF-hand-BS Pfam 100 118
IPR025064 DUF4005 Pfam 501 566
IPR000048 IQ_motif_EF-hand-BS SMART 119 140
IPR000048 IQ_motif_EF-hand-BS SMART 96 118

No CAZYmes available for this sequence

No external refs found!