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  5. LOC_Os01g52540.1

LOC_Os01g52540.1


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_01_0016981 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016981_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g52540.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g52540.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_325
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_105


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 3 112
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 6 115
IPR003340 B3_DNA-bd ProSiteProfiles 7 110
IPR003340 B3_DNA-bd Pfam 20 103
IPR003340 B3_DNA-bd SMART 10 110
IPR003340 B3_DNA-bd CDD 8 107

No CAZYmes available for this sequence

No external refs found!