LOC_Os01g52630.1

Description : Regulator of chromosome condensation (RCC1) family protein

Gene families : OG_01_0003561 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003561_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g52630.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g52630.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_375
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_189

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR009091	RCC1/BLIP-II	SUPERFAMILY	128	421
IPR000408	Reg_chr_condens	PRINTS	382	403
IPR000408	Reg_chr_condens	PRINTS	59	72
IPR000408	Reg_chr_condens	PRINTS	78	94
IPR000408	Reg_chr_condens	PRINTS	185	201
IPR000408	Reg_chr_condens	PRINTS	23	39
IPR000408	Reg_chr_condens	PRINTS	312	330
IPR000408	Reg_chr_condens	ProSiteProfiles	270	322
IPR000408	Reg_chr_condens	ProSitePatterns	248	258
IPR009091	RCC1/BLIP-II	Gene3D	1	207
IPR009091	RCC1/BLIP-II	Gene3D	208	442
IPR000408	Reg_chr_condens	ProSiteProfiles	323	385
IPR000408	Reg_chr_condens	ProSitePatterns	62	72
IPR000408	Reg_chr_condens	ProSiteProfiles	146	198
IPR000408	Reg_chr_condens	ProSiteProfiles	22	75
IPR000408	Reg_chr_condens	ProSiteProfiles	207	261
IPR000408	Reg_chr_condens	ProSiteProfiles	76	145
IPR000408	Reg_chr_condens	Pfam	75	142
IPR000408	Reg_chr_condens	Pfam	210	258
IPR000408	Reg_chr_condens	Pfam	271	318
IPR000408	Reg_chr_condens	Pfam	322	382
IPR000408	Reg_chr_condens	Pfam	21	72

No CAZYmes available for this sequence

External Links

No external refs found!