1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g53980.1

LOC_Os01g53980.1


Description : IQ-domain 26


Gene families : OG_01_0012254 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012254_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g53980.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g53980.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_51


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027417 P-loop_NTPase SUPERFAMILY 87 131
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 89 117
IPR000048 IQ_motif_EF-hand-BS SMART 88 110
IPR000048 IQ_motif_EF-hand-BS SMART 111 132
IPR025064 DUF4005 Pfam 260 338
IPR000048 IQ_motif_EF-hand-BS Pfam 90 110
IPR000048 IQ_motif_EF-hand-BS Pfam 114 130
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 113 140

No CAZYmes available for this sequence

No external refs found!