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  5. LOC_Os01g55200.1

LOC_Os01g55200.1


Description : potassium channel in Arabidopsis thaliana 1


Gene families : OG_01_0005630 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005630_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g55200.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_191


Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity ISM GOs from InterProScan
MF GO:0005249 voltage-gated potassium channel activity ISM GOs from InterProScan
BP GO:0006811 monoatomic ion transport ISM GOs from InterProScan
BP GO:0006813 potassium ion transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000595 cNMP-bd_dom CDD 381 488
IPR000595 cNMP-bd_dom SMART 381 498
IPR000595 cNMP-bd_dom Pfam 401 486
IPR018490 cNMP-bd_dom_sf SUPERFAMILY 308 499
IPR014710 RmlC-like_jellyroll Gene3D 374 501
IPR005821 Ion_trans_dom Pfam 64 310
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 295 304
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 99 109
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 110 119
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 251 268
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 277 288
IPR000595 cNMP-bd_dom ProSiteProfiles 381 483
IPR045319 KAT/AKT PANTHER 10 499

No CAZYmes available for this sequence

No external refs found!