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  5. LOC_Os01g55430.2

LOC_Os01g55430.2


Description : tubby like protein 7


Gene families : OG_01_0128532 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0128532_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g55430.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g55430.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_56


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR025659 Tubby-like_C SUPERFAMILY 101 368
IPR001810 F-box_dom Pfam 51 92
IPR025659 Tubby-like_C Gene3D 107 368
IPR000007 Tubby_C Pfam 112 365
IPR000007 Tubby_C PRINTS 284 301
IPR000007 Tubby_C PRINTS 302 318
IPR000007 Tubby_C PRINTS 348 368
IPR000007 Tubby_C PRINTS 166 182
IPR000007 Tubby_C PRINTS 182 206
IPR000007 Tubby_C PRINTS 327 346
IPR036047 F-box-like_dom_sf SUPERFAMILY 47 93

No CAZYmes available for this sequence

No external refs found!