1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g55690.1

LOC_Os01g55690.1


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0012008 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012008_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g55690.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g55690.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_232
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_94


Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006045 Cupin_1 SMART 51 248
IPR006045 Cupin_1 SMART 319 468
IPR014710 RmlC-like_jellyroll Gene3D 322 490
IPR006045 Cupin_1 Pfam 320 467
IPR006045 Cupin_1 Pfam 52 210
IPR014710 RmlC-like_jellyroll Gene3D 36 321
IPR006044 11S_seedstore_pln PRINTS 318 335
IPR006044 11S_seedstore_pln PRINTS 423 441
IPR006044 11S_seedstore_pln PRINTS 341 361
IPR006044 11S_seedstore_pln PRINTS 405 420
IPR006044 11S_seedstore_pln PRINTS 445 462
IPR006044 11S_seedstore_pln PRINTS 387 403
IPR011051 RmlC_Cupin_sf SUPERFAMILY 11 477
IPR022379 11S_seedstore_CS ProSitePatterns 306 328

No CAZYmes available for this sequence

No external refs found!