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  5. Sevir.4G065200.1

Sevir.4G065200.1


Description : D111/G-patch domain-containing protein


Gene families : OG_01_0014827 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014827_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G065200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G065200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_78
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_119


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
BP GO:0045292 mRNA cis splicing, via spliceosome ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000467 G_patch_dom SMART 214 260
IPR000467 G_patch_dom Pfam 219 258
IPR000467 G_patch_dom ProSiteProfiles 216 262
IPR034653 SPF45_RRM CDD 280 376
IPR040052 RBM17 PIRSF 3 383
IPR003954 RRM_dom_euk SMART 283 364
IPR040052 RBM17 PANTHER 1 378
IPR035979 RBD_domain_sf SUPERFAMILY 284 370
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 281 367
IPR000504 RRM_dom ProSiteProfiles 282 368

No CAZYmes available for this sequence

No external refs found!