1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g56200.1

LOC_Os01g56200.1


Description : NPR1-like protein 3


Gene families : OG_01_0000583 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000583_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g56200.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g56200.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_238
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_108


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway ISM GOs from InterProScan
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway ISM GOs from InterProScan
BP GO:2000031 regulation of salicylic acid mediated signaling pathway ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000210 BTB/POZ_dom Pfam 97 194
IPR021094 NPR1/NIM1-like_C Pfam 422 626
IPR036770 Ankyrin_rpt-contain_sf Gene3D 298 446
IPR044292 NPR PANTHER 17 629
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 321 424
IPR024228 NPR_central_dom Pfam 276 323
IPR000210 BTB/POZ_dom SMART 97 276
IPR002110 Ankyrin_rpt Pfam 350 392
IPR002110 Ankyrin_rpt SMART 380 409
IPR002110 Ankyrin_rpt SMART 346 376
IPR002110 Ankyrin_rpt SMART 317 345
IPR011333 SKP1/BTB/POZ_sf Gene3D 70 274
IPR000210 BTB/POZ_dom ProSiteProfiles 97 191
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 77 239
IPR002110 Ankyrin_rpt ProSiteProfiles 380 412

No CAZYmes available for this sequence

No external refs found!