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  5. LOC_Os01g58380.1

LOC_Os01g58380.1


Description : 3-hydroxyacyl-CoA dehydrogenase family protein


Gene families : OG_01_0016213 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016213_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g58380.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g58380.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_310
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_226


Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ISM GOs from InterProScan
MF GO:0070403 NAD+ binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008927 6-PGluconate_DH-like_C_sf SUPERFAMILY 192 295
IPR006176 3-OHacyl-CoA_DH_NAD-bd Pfam 13 190
IPR013328 6PGD_dom2 Gene3D 196 300
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 12 192
IPR022694 3-OHacyl-CoA_DH PIRSF 5 301
IPR006108 3HC_DH_C Pfam 193 289
IPR006180 3-OHacyl-CoA_DH_CS ProSitePatterns 190 215

No CAZYmes available for this sequence

No external refs found!