LOC_Os01g58780.1

Description : RING-H2 finger C1A

Gene families : OG_01_0013274 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013274_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g58780.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g58780.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_22

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013083	Znf_RING/FYVE/PHD	Gene3D	155	239
IPR001841	Znf_RING	Pfam	191	233
IPR039525	RNF126-like_zinc-ribbon	Pfam	6	36
IPR001841	Znf_RING	SMART	192	232
IPR001841	Znf_RING	ProSiteProfiles	192	233

No CAZYmes available for this sequence

External Links

No external refs found!