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  5. LOC_Os01g61330.1

LOC_Os01g61330.1


Description : Ankyrin repeat family protein


Gene families : OG_01_0015006 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015006_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g61330.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g61330.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_135
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_225


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf Gene3D 148 282
IPR002110 Ankyrin_rpt ProSiteProfiles 347 379
IPR036770 Ankyrin_rpt-contain_sf Gene3D 283 425
IPR002110 Ankyrin_rpt ProSiteProfiles 380 412
IPR002110 Ankyrin_rpt Pfam 222 267
IPR013783 Ig-like_fold Gene3D 30 147
IPR002110 Ankyrin_rpt ProSiteProfiles 313 337
IPR008962 PapD-like_sf SUPERFAMILY 34 155
IPR002110 Ankyrin_rpt PRINTS 314 329
IPR002110 Ankyrin_rpt PRINTS 363 377
IPR000535 MSP_dom ProSiteProfiles 25 153
IPR002110 Ankyrin_rpt Pfam 345 406
IPR002110 Ankyrin_rpt Pfam 282 341
IPR000535 MSP_dom Pfam 41 127
IPR002110 Ankyrin_rpt SMART 280 309
IPR002110 Ankyrin_rpt SMART 226 255
IPR002110 Ankyrin_rpt SMART 313 343
IPR002110 Ankyrin_rpt SMART 347 376
IPR002110 Ankyrin_rpt SMART 153 183
IPR002110 Ankyrin_rpt SMART 380 409
IPR002110 Ankyrin_rpt ProSiteProfiles 226 258
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 158 406

No CAZYmes available for this sequence

No external refs found!