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  5. LOC_Os01g63200.1

LOC_Os01g63200.1


Description : laccase 7


Gene families : OG_01_0001268 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001268_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g63200.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g63200.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_18
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_15


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
BP GO:0046274 lignin catabolic process ISM GOs from InterProScan
CC GO:0048046 apoplast ISM GOs from InterProScan
MF GO:0052716 hydroquinone:oxygen oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008972 Cupredoxin SUPERFAMILY 151 340
IPR008972 Cupredoxin Gene3D 153 325
IPR034285 CuRO_2_LCC CDD 158 306
IPR034288 CuRO_1_LCC CDD 26 142
IPR011706 Cu-oxidase_C Pfam 421 534
IPR008972 Cupredoxin SUPERFAMILY 347 553
IPR011707 Cu-oxidase-like_N Pfam 33 144
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 516 527
IPR008972 Cupredoxin Gene3D 366 554
IPR008972 Cupredoxin SUPERFAMILY 13 172
IPR001117 Cu-oxidase_2nd Pfam 157 308
IPR017761 Laccase TIGRFAM 22 552
IPR008972 Cupredoxin Gene3D 13 142
IPR045087 Cu-oxidase_fam PANTHER 9 549
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 555 1.9e-120 37 528
No external refs found!