LOC_Os01g65500.1

Description : chloride channel C

Gene families : OG_01_0001544 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001544_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g65500.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g65500.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_105
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_200

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	ISM	GOs from InterProScan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901702	salt transmembrane transporter activity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR014743	Cl-channel_core	SUPERFAMILY	86	603
IPR001807	Cl-channel_volt-gated	PRINTS	177	194
IPR001807	Cl-channel_volt-gated	PRINTS	587	601
IPR001807	Cl-channel_volt-gated	PRINTS	272	291
IPR001807	Cl-channel_volt-gated	PRINTS	549	568
IPR001807	Cl-channel_volt-gated	PRINTS	208	227
IPR001807	Cl-channel_volt-gated	PRINTS	499	519
IPR001807	Cl-channel_volt-gated	PRINTS	531	547
IPR000644	CBS_dom	Pfam	729	778
IPR000644	CBS_dom	Pfam	613	672
IPR001807	Cl-channel_volt-gated	Pfam	165	581
IPR000644	CBS_dom	ProSiteProfiles	729	789
IPR002251	Cl_channel_pln	PRINTS	325	332
IPR002251	Cl_channel_pln	PRINTS	307	317
IPR002251	Cl_channel_pln	PRINTS	82	90
IPR002251	Cl_channel_pln	PRINTS	293	301
IPR002251	Cl_channel_pln	PRINTS	451	467
IPR000644	CBS_dom	SMART	620	673
IPR000644	CBS_dom	SMART	732	784

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os01g65500.1

Expression Profile

Co-expression Networks

Functional Annotation