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  5. LOC_Os01g65680.1

LOC_Os01g65680.1


Description : catalytic LigB subunit of aromatic ring-opening dioxygenase family


Gene families : OG_01_0007004 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007004_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g65680.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g65680.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_150
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_103


Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process ISM GOs from InterProScan
MF GO:0008198 ferrous iron binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014436 Extradiol_dOase_DODA CDD 59 317
IPR014436 Extradiol_dOase_DODA PIRSF 52 319
IPR004183 Xdiol_dOase_suB Pfam 59 317

No CAZYmes available for this sequence

No external refs found!