LOC_Os01g70010.1

Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Gene families : OG_01_0008862 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008862_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g70010.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g70010.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_190
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_204

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0042254	ribosome biogenesis	ISM	GOs from InterProScan
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:1990904	ribonucleoprotein complex	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR004037	Ribosomal_eL8-like_CS	ProSitePatterns	151	168
IPR018492	Ribosomal_eL8/Nhp2	PRINTS	132	145
IPR018492	Ribosomal_eL8/Nhp2	PRINTS	148	158
IPR018492	Ribosomal_eL8/Nhp2	PRINTS	158	172
IPR018492	Ribosomal_eL8/Nhp2	PRINTS	113	127
IPR029064	Ribosomal_eL30-like_sf	Gene3D	51	218
IPR029064	Ribosomal_eL30-like_sf	SUPERFAMILY	105	204
IPR001921	Ribosomal_eL8	PRINTS	67	86
IPR001921	Ribosomal_eL8	PRINTS	47	64
IPR001921	Ribosomal_eL8	PRINTS	30	47
IPR004038	Ribosomal_eL8/eL30/eS12/Gad45	Pfam	100	190

No CAZYmes available for this sequence

External Links

No external refs found!