LOC_Os01g72080.1

Description : EF hand calcium-binding protein family

Gene families : OG_01_0028707 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028707_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g72080.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g72080.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_37
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_11

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011992	EF-hand-dom_pair	SUPERFAMILY	81	189
IPR002048	EF_hand_dom	Pfam	121	187
IPR002048	EF_hand_dom	ProSiteProfiles	118	153
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	131	143
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	171	183
IPR002048	EF_hand_dom	CDD	122	185
IPR002048	EF_hand_dom	SMART	162	190
IPR002048	EF_hand_dom	SMART	122	150
IPR002048	EF_hand_dom	ProSiteProfiles	158	193

No CAZYmes available for this sequence

External Links

No external refs found!