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  5. LOC_Os01g72230.1

LOC_Os01g72230.1


Description : Calcium-dependent ARF-type GTPase activating protein family


Gene families : OG_01_0014712 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014712_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g72230.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g72230.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_203
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_152


Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity ISM GOs from InterProScan
MF GO:0005543 phospholipid binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR038508 ArfGAP_dom_sf Gene3D 35 174
IPR001164 ArfGAP_dom SMART 50 169
IPR001164 ArfGAP_dom PRINTS 102 123
IPR001164 ArfGAP_dom PRINTS 62 81
IPR001164 ArfGAP_dom PRINTS 81 98
IPR001164 ArfGAP_dom ProSiteProfiles 50 164
IPR037278 ARFGAP/RecO SUPERFAMILY 51 166
IPR035892 C2_domain_sf SUPERFAMILY 222 316
IPR000008 C2_dom ProSiteProfiles 208 322
IPR035892 C2_domain_sf Gene3D 224 381
IPR044518 ARF_GAP_AGD11/12/13 PANTHER 39 381
IPR000008 C2_dom Pfam 226 314
IPR000008 C2_dom SMART 226 321
IPR001164 ArfGAP_dom Pfam 51 166

No CAZYmes available for this sequence

No external refs found!