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  5. LOC_Os01g73230.1

LOC_Os01g73230.1


Description : syntaxin of plants 61


Gene families : OG_01_0004749 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004749_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g73230.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g73230.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_332
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_161


Type GO Term Name Evidence Source
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
BP GO:0048193 Golgi vesicle transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045242 Syntaxin PANTHER 1 233
IPR015260 Syntaxin-6_N Pfam 6 98
IPR000727 T_SNARE_dom Pfam 179 230
IPR010989 SNARE SUPERFAMILY 5 103
IPR000727 T_SNARE_dom SMART 137 204
IPR000727 T_SNARE_dom ProSiteProfiles 142 204

No CAZYmes available for this sequence

No external refs found!