LOC_Os02g03210.1

Description : D-arabinono-1,4-lactone oxidase family protein

Gene families : OG_01_0004265 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004265_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g03210.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g03210.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_172

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	ISM	GOs from InterProScan
MF	GO:0071949	FAD binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007173	ALO_C	Pfam	404	541
IPR010030	GULO_Plant	TIGRFAM	32	593
IPR016164	FAD-linked_Oxase-like_C	SUPERFAMILY	396	535
IPR016166	FAD-bd_PCMH	ProSiteProfiles	59	241
IPR036318	FAD-bd_PCMH-like_sf	SUPERFAMILY	51	240
IPR006094	Oxid_FAD_bind_N	Pfam	64	198
IPR016169	FAD-bd_PCMH_sub2	Gene3D	122	240

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
AA7	458	600	1.5e-10	61	260

External Links

No external refs found!