LOC_Os02g03270.1

Description : AT-hook motif nuclear-localized protein 1

Gene families : OG_01_0007006 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007006_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g03270.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g03270.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_312
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_4

Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005175	PPC_dom	Pfam	174	287
IPR005175	PPC_dom	ProSiteProfiles	169	311
IPR017956	AT_hook_DNA-bd_motif	SMART	67	79
IPR017956	AT_hook_DNA-bd_motif	SMART	115	127
IPR005175	PPC_dom	CDD	173	287
IPR039605	AHL	PANTHER	10	387

No CAZYmes available for this sequence

External Links

No external refs found!