LOC_Os02g04490.1

Description : histone acetyltransferase of the CBP family 12

Gene families : OG_01_0004468 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004468_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g04490.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g04490.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_367
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_67

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004402	histone acetyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0006473	protein acetylation	None	Extended
BP	GO:0006475	internal protein amino acid acetylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008080	N-acetyltransferase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016407	acetyltransferase activity	None	Extended
MF	GO:0016410	N-acyltransferase activity	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016573	histone acetylation	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0018393	internal peptidyl-lysine acetylation	None	Extended
BP	GO:0018394	peptidyl-lysine acetylation	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0034212	peptide N-acetyltransferase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140993	histone modifying activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013178	Histone_AcTrfase_Rtt109/CBP	Pfam	1089	1317
IPR013083	Znf_RING/FYVE/PHD	Gene3D	983	1032
IPR013178	Histone_AcTrfase_Rtt109/CBP	PANTHER	120	678
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	992	1034
IPR035898	TAZ_dom_sf	Gene3D	1543	1660
IPR000433	Znf_ZZ	ProSiteProfiles	1491	1533
IPR000433	Znf_ZZ	Pfam	1489	1530
IPR043145	Znf_ZZ_sf	Gene3D	1486	1538
IPR043145	Znf_ZZ_sf	Gene3D	1363	1425
IPR000433	Znf_ZZ	SMART	1486	1531
IPR000433	Znf_ZZ	SMART	1366	1410
IPR000433	Znf_ZZ	ProSitePatterns	1492	1519
IPR035898	TAZ_dom_sf	SUPERFAMILY	1548	1631
IPR013178	Histone_AcTrfase_Rtt109/CBP	PANTHER	675	1661
IPR000197	Znf_TAZ	Pfam	1556	1626
IPR000433	Znf_ZZ	ProSiteProfiles	1366	1413
IPR000197	Znf_TAZ	SMART	1549	1627
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	960	1031
IPR031162	CBP_P300_HAT	ProSiteProfiles	1049	1485
IPR000197	Znf_TAZ	ProSiteProfiles	1545	1629
IPR013178	Histone_AcTrfase_Rtt109/CBP	SMART	1082	1379

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os02g04490.1

Expression Profile

Co-expression Networks

Functional Annotation