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  5. LOC_Os02g04950.1

LOC_Os02g04950.1


Description : splicing factor, putative


Gene families : OG_01_0004616 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004616_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g04950.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g04950.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_196


Type GO Term Name Evidence Source
BP GO:0000245 spliceosomal complex assembly ISM GOs from InterProScan
MF GO:0003729 mRNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016024 ARM-type_fold SUPERFAMILY 597 732
IPR038737 SF3b_su1-like PANTHER 1 734
IPR016024 ARM-type_fold SUPERFAMILY 12 623
IPR011989 ARM-like Gene3D 513 732
IPR011989 ARM-like Gene3D 118 512

No CAZYmes available for this sequence

No external refs found!