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  5. LOC_Os02g08180.1

LOC_Os02g08180.1


Description : secE/sec61-gamma protein transport protein


Gene families : OG_01_0003074 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003074_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g08180.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g08180.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_4


Type GO Term Name Evidence Source
BP GO:0006605 protein targeting ISM GOs from InterProScan
BP GO:0006886 intracellular protein transport ISM GOs from InterProScan
MF GO:0008320 protein transmembrane transporter activity ISM GOs from InterProScan
BP GO:0015031 protein transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001901 Translocase_SecE/Sec61-g Pfam 13 65
IPR001901 Translocase_SecE/Sec61-g ProSitePatterns 14 42
IPR023391 Prot_translocase_SecE_dom_sf SUPERFAMILY 5 65
IPR023391 Prot_translocase_SecE_dom_sf Gene3D 7 68
IPR001901 Translocase_SecE/Sec61-g Hamap 9 64
IPR008158 Translocase_Sec61-g TIGRFAM 8 66

No CAZYmes available for this sequence

No external refs found!