LOC_Os02g08490.1

Description : casein lytic proteinase B4

Gene families : OG_01_0003347 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003347_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g08490.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g08490.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_54
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_207

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	ISM	GOs from InterProScan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042026	protein refolding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036628	Clp_N_dom_sf	Gene3D	96	242
IPR019489	Clp_ATPase_C	SMART	870	959
IPR019489	Clp_ATPase_C	Pfam	870	950
IPR036628	Clp_N_dom_sf	SUPERFAMILY	99	250
IPR003959	ATPase_AAA_core	Pfam	694	863
IPR018368	ClpA/B_CS1	ProSitePatterns	388	400
IPR001270	ClpA/B	PRINTS	806	820
IPR001270	ClpA/B	PRINTS	699	717
IPR001270	ClpA/B	PRINTS	773	791
IPR001270	ClpA/B	PRINTS	744	762
IPR003959	ATPase_AAA_core	Pfam	298	414
IPR027417	P-loop_NTPase	Gene3D	437	642
IPR004176	Clp_R_dom	ProSiteProfiles	97	240
IPR027417	P-loop_NTPase	SUPERFAMILY	644	952
IPR003593	AAA+_ATPase	SMART	292	437
IPR003593	AAA+_ATPase	SMART	695	842
IPR028299	ClpA/B_CS2	ProSitePatterns	729	747
IPR027417	P-loop_NTPase	SUPERFAMILY	253	643
IPR027417	P-loop_NTPase	Gene3D	243	436
IPR027417	P-loop_NTPase	Gene3D	647	868
IPR004176	Clp_R_dom	Pfam	188	239
IPR004176	Clp_R_dom	Pfam	111	162
IPR041546	ClpA/ClpB_AAA_lid	Pfam	437	538
IPR017730	Chaperonin_ClpB	TIGRFAM	100	954

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os02g08490.1

Expression Profile

Co-expression Networks

Functional Annotation