- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : lipoxygenase 2
Gene families : OG_01_0009085 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009085_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g10120.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g10120.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_204 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_170 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001024 | PLAT/LH2_dom | SMART | 83 | 214 |
| IPR013819 | LipOase_C | Pfam | 226 | 909 |
| IPR001246 | LipOase_plant | PRINTS | 248 | 264 |
| IPR001246 | LipOase_plant | PRINTS | 209 | 230 |
| IPR001246 | LipOase_plant | PRINTS | 411 | 427 |
| IPR001246 | LipOase_plant | PRINTS | 518 | 542 |
| IPR001246 | LipOase_plant | PRINTS | 280 | 299 |
| IPR001246 | LipOase_plant | PRINTS | 183 | 201 |
| IPR001246 | LipOase_plant | PRINTS | 450 | 469 |
| IPR001246 | LipOase_plant | PRINTS | 839 | 853 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 218 | 926 |
| IPR013819 | LipOase_C | ProSiteProfiles | 216 | 926 |
| IPR000907 | LipOase | PANTHER | 110 | 925 |
| IPR013819 | LipOase_C | PRINTS | 601 | 621 |
| IPR013819 | LipOase_C | PRINTS | 581 | 598 |
| IPR013819 | LipOase_C | PRINTS | 563 | 580 |
| IPR020834 | LipOase_CS | ProSitePatterns | 608 | 618 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 91 | 213 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 581 | 595 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 336 | 442 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 83 | 217 |
| IPR001024 | PLAT/LH2_dom | Pfam | 146 | 212 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 92 | 214 |
No CAZYmes available for this sequence
| No external refs found! |