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  5. LOC_Os02g10190.1

LOC_Os02g10190.1


Description : Putative glycosyl hydrolase of unknown function (DUF1680)


Gene families : OG_01_0000551 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000551_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g10190.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g10190.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_294
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_230


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0046373 L-arabinose metabolic process ISM GOs from InterProScan
MF GO:0046556 alpha-L-arabinofuranosidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036195 AbfB_ABD_sf SUPERFAMILY 774 873
IPR012878 Beta-AFase-like_GH127_cat Pfam 144 666
IPR008928 6-hairpin_glycosidase_sf SUPERFAMILY 201 512
HMM Family HMM Length Query Length e-Value Query Start Query End
GH146 503 892 3e-175 144 666
No external refs found!