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  5. LOC_Os02g19804.1

LOC_Os02g19804.1


Description : Zinc finger (CCCH-type/C3HC4-type RING finger) family protein


Gene families : OG_01_0013591 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013591_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g19804.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g19804.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_165


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 187 215
IPR001841 Znf_RING SMART 265 302
IPR000571 Znf_CCCH Pfam 188 213
IPR017907 Znf_RING_CS ProSitePatterns 280 289
IPR000571 Znf_CCCH SMART 187 214
IPR013083 Znf_RING/FYVE/PHD Gene3D 263 322
IPR039971 CWC24-like PANTHER 13 325
IPR036855 Znf_CCCH_sf SUPERFAMILY 186 218
IPR001841 Znf_RING ProSiteProfiles 265 303

No CAZYmes available for this sequence

No external refs found!