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  5. LOC_Os02g20690.1

LOC_Os02g20690.1


Description : BTB-POZ and MATH domain 2


Gene families : OG_01_0022862 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0022862_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g20690.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_66


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002083 MATH/TRAF_dom CDD 21 149
IPR045005 BPM1-6 PANTHER 7 320
IPR000210 BTB/POZ_dom Pfam 186 288
IPR008974 TRAF-like Gene3D 18 152
IPR000210 BTB/POZ_dom SMART 188 289
IPR000210 BTB/POZ_dom ProSiteProfiles 188 255
IPR002083 MATH/TRAF_dom SMART 24 131
IPR002083 MATH/TRAF_dom Pfam 35 145
IPR002083 MATH/TRAF_dom ProSiteProfiles 19 148
IPR011333 SKP1/BTB/POZ_sf Gene3D 153 319
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 173 287

No CAZYmes available for this sequence

No external refs found!