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  5. LOC_Os02g21490.1

LOC_Os02g21490.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008010 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008010_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g21490.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g21490.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_88
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_77


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 195 236
IPR001680 WD40_rpt SMART 143 183
IPR001680 WD40_rpt SMART 367 408
IPR001680 WD40_rpt SMART 230 269
IPR001680 WD40_rpt SMART 411 451
IPR001680 WD40_rpt SMART 188 227
IPR001680 WD40_rpt SMART 272 318
IPR001680 WD40_rpt ProSiteProfiles 150 184
IPR001680 WD40_rpt Pfam 193 225
IPR001680 WD40_rpt Pfam 243 269
IPR001680 WD40_rpt Pfam 374 408
IPR001680 WD40_rpt Pfam 148 183
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 130 451
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 142 450
IPR001680 WD40_rpt ProSiteProfiles 236 278

No CAZYmes available for this sequence

No external refs found!