LOC_Os02g25580.1

Description : Sec1/munc18-like (SM) proteins superfamily

Gene families : OG_01_0000139 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000139_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g25580.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g25580.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_383
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_126

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027482	Sec1-like_dom2	Gene3D	513	659
IPR027482	Sec1-like_dom2	Gene3D	150	274
IPR001619	Sec1-like	PANTHER	17	659
IPR036045	Sec1-like_sf	SUPERFAMILY	15	652
IPR001619	Sec1-like	PIRSF	12	659
IPR001619	Sec1-like	Pfam	42	648
IPR043127	Sec-1-like_dom3a	Gene3D	275	390
IPR043154	Sec-1-like_dom1	Gene3D	9	145

No CAZYmes available for this sequence

External Links

No external refs found!