LOC_Os02g28830.1

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0000869 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000869_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g28830.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g28830.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_280
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_229

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006486	protein glycosylation	None	Extended
BP	GO:0006493	protein O-linked glycosylation	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISM	GOs from InterProScan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019734	TPR_repeat	SMART	1	28
IPR019734	TPR_repeat	SMART	29	62
IPR019734	TPR_repeat	SMART	97	130
IPR019734	TPR_repeat	SMART	131	164
IPR019734	TPR_repeat	SMART	63	96
IPR011990	TPR-like_helical_dom_sf	Gene3D	102	134
IPR011990	TPR-like_helical_dom_sf	Gene3D	135	237
IPR029489	OGT/SEC/SPY_C	Pfam	178	416
IPR029489	OGT/SEC/SPY_C	Pfam	428	614
IPR019734	TPR_repeat	ProSiteProfiles	97	130
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	2	511
IPR011990	TPR-like_helical_dom_sf	Gene3D	1	101
IPR019734	TPR_repeat	ProSiteProfiles	63	96
IPR019734	TPR_repeat	ProSiteProfiles	131	164

No CAZYmes available for this sequence

External Links

No external refs found!