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  5. LOC_Os02g29040.1

LOC_Os02g29040.1


Description : ankyrin repeat family protein


Gene families : OG_01_0021405 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0021405_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g29040.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g29040.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_240
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_494


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt ProSiteProfiles 86 118
IPR002110 Ankyrin_rpt ProSiteProfiles 215 247
IPR002110 Ankyrin_rpt PRINTS 200 214
IPR002110 Ankyrin_rpt PRINTS 120 135
IPR002110 Ankyrin_rpt SMART 86 115
IPR002110 Ankyrin_rpt SMART 151 180
IPR002110 Ankyrin_rpt SMART 119 148
IPR002110 Ankyrin_rpt SMART 52 82
IPR002110 Ankyrin_rpt SMART 215 244
IPR002110 Ankyrin_rpt SMART 184 213
IPR036770 Ankyrin_rpt-contain_sf Gene3D 3 261
IPR002110 Ankyrin_rpt ProSiteProfiles 119 151
IPR002110 Ankyrin_rpt Pfam 153 205
IPR002110 Ankyrin_rpt Pfam 57 148
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 16 249
IPR002110 Ankyrin_rpt ProSiteProfiles 151 183

No CAZYmes available for this sequence

No external refs found!