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  5. LOC_Os02g33630.1

LOC_Os02g33630.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008206 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008206_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g33630.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g33630.1 No neighbors in network
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_30


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 535 549
IPR001680 WD40_rpt ProSiteProfiles 377 419
IPR020472 G-protein_beta_WD-40_rep PRINTS 397 411
IPR020472 G-protein_beta_WD-40_rep PRINTS 355 369
IPR020472 G-protein_beta_WD-40_rep PRINTS 535 549
IPR001680 WD40_rpt ProSiteProfiles 337 369
IPR001680 WD40_rpt Pfam 332 368
IPR001680 WD40_rpt Pfam 529 548
IPR001680 WD40_rpt Pfam 373 410
IPR040324 WDR44/Dgr2 PANTHER 9 672
IPR001680 WD40_rpt ProSiteProfiles 257 298
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 253 562
IPR001680 WD40_rpt ProSiteProfiles 527 557
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 251 548
IPR001680 WD40_rpt SMART 371 410
IPR001680 WD40_rpt SMART 250 289
IPR001680 WD40_rpt SMART 330 368
IPR001680 WD40_rpt SMART 412 451
IPR001680 WD40_rpt SMART 466 506
IPR001680 WD40_rpt SMART 511 548

No CAZYmes available for this sequence

No external refs found!