LOC_Os02g33850.1

Description : Ribosomal protein S5/Elongation factor G/III/V family protein

Gene families : OG_01_0007644 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007644_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g33850.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g33850.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_40

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	590	865
IPR000795	T_Tr_GTP-bd_dom	ProSiteProfiles	14	201
IPR000640	EFG_V-like	SMART	863	952
IPR027417	P-loop_NTPase	Gene3D	9	248
IPR004161	EFTu-like_2	Pfam	417	498
IPR000795	T_Tr_GTP-bd_dom	PRINTS	65	73
IPR000795	T_Tr_GTP-bd_dom	PRINTS	142	151
IPR000795	T_Tr_GTP-bd_dom	PRINTS	90	100
IPR000795	T_Tr_GTP-bd_dom	PRINTS	106	117
IPR000795	T_Tr_GTP-bd_dom	PRINTS	18	31
IPR035647	EFG_III/V	SUPERFAMILY	866	963
IPR027417	P-loop_NTPase	SUPERFAMILY	13	302
IPR035647	EFG_III/V	SUPERFAMILY	512	588
IPR000640	EFG_V-like	Pfam	864	948
IPR041095	EFG_II	Pfam	516	579
IPR000795	T_Tr_GTP-bd_dom	Pfam	15	320
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	608	860
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	360	508

No CAZYmes available for this sequence

External Links

No external refs found!