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  5. LOC_Os02g35950.1

LOC_Os02g35950.1


Description : RNA-binding protein 47C\'


Gene families : OG_01_0006848 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006848_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g35950.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g35950.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_334
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_214


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 184 256
IPR000504 RRM_dom ProSiteProfiles 1 70
IPR000504 RRM_dom SMART 185 252
IPR000504 RRM_dom SMART 84 158
IPR000504 RRM_dom SMART 1 66
IPR000504 RRM_dom ProSiteProfiles 83 162
IPR035979 RBD_domain_sf SUPERFAMILY 2 70
IPR035979 RBD_domain_sf SUPERFAMILY 174 284
IPR035979 RBD_domain_sf SUPERFAMILY 75 174
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 70 175
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 176 287
IPR000504 RRM_dom Pfam 5 58
IPR000504 RRM_dom Pfam 186 249
IPR000504 RRM_dom Pfam 85 155
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 1 69

No CAZYmes available for this sequence

No external refs found!